2016 Pre-Build Model

Based on 1sep.pdb

2016 Pre-Build Model Structure
 
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2016 Pre-Build Model Directions

2016 Pre-Build Model

Based on 1sep.pdb

Directions:

The 2016 Pre-Build Model should represent amino acids 93-261 of chain A of the Sepiapterin Reductase protein based on the PDB file 1sep.pdb. This section is 168 amino acids long and will require a toober that is 336cm long at the scale of 1 amino acid = 2cm.

The pre-build model is worth 40% of a team's final score for the event. The pre-build model will be created using a purchased "pre-build" Mini-Toober kit from www.3dmoleculardesigns.com, or with found materials of the participant's choosing such as KwikTwist tie-down ropes. The same pre-build model will be used at each level of the competition (invitational, regional, state and national) and participants will take their pre-build model home after each event.


Resources:

Jmol Quick Reference Sheet - A double-sided Jmol Quick Reference Sheet that highlights key commands and useful resources for designing protein models in Jmol on one side and a clear chart of the 20 amino acids on the other side.

To learn Jmol and how to use this competition environment, visit Section 3 - Building Your Physical Protein Models of the MSOE Center for BioMolecular Modeling's Protein Modeling Event participant resources.


Parts List:

parts list

Required Browser:

For the interactive Jmol display to function correctly, a Javascript enabled HTML5 compatible browser must be used, including:

  • Internet Explorer 9 or later
  • Firefox 29 or later
  • Chrome 27 or later
  • Safari 5.1 or later
  • Opera 12.1 or later
  • Android Browser 4 or later